=> Bootstrap dependency digest>=20010302: found digest-20160304
WARNING: [license.mk] Every package should define a LICENSE.
===> Skipping vulnerability checks.
WARNING: No /var/db/pkg/pkg-vulnerabilities file found.
WARNING: To fix run: `/usr/sbin/pkg_admin -K /var/db/pkg fetch-pkg-vulnerabilities'.
=> Checksum SHA1 OK for slurm-2.6.4.tar.bz2
=> Checksum RMD160 OK for slurm-2.6.4.tar.bz2
=> Checksum SHA512 OK for slurm-2.6.4.tar.bz2
===> Installing dependencies for slurm-2.6.4nb9
==========================================================================
The following variables will affect the build process of this package,
slurm-2.6.4nb9. Their current value is shown below:
* CURSES_DEFAULT = curses
* PAM_DEFAULT = openpam
* PYTHON_VERSION_DEFAULT = 27
* SSLBASE = /usr
* SSLCERTS = /etc/openssl/certs
* SSLDIR = /etc/openssl
* SSLKEYS = /etc/openssl/private
Based on these variables, the following variables have been set:
* CURSES_TYPE = curses
* PAMBASE (defined, but empty)
* PYPACKAGE = python27
You may want to abort the process now with CTRL-C and change their value
before continuing. Be sure to run `/usr/bin/make clean' after
the changes.
==========================================================================
=> Tool dependency libtool-base>=2.4.2nb9: found libtool-base-2.4.6
=> Tool dependency perl>=5.0: found perl-5.26.1nb1
=> Tool dependency pkgconf-[0-9]*: found pkgconf-1.3.5
=> Tool dependency checkperms>=1.1: found checkperms-1.11nb1
=> Build dependency python27>=2.7.1nb2: found python27-2.7.14
=> Build dependency cwrappers>=20150314: found cwrappers-20171108
=> Full dependency munge>=0.5.10: found munge-0.5.11nb7
===> Overriding tools for slurm-2.6.4nb9
===> Extracting for slurm-2.6.4nb9
===> Patching for slurm-2.6.4nb9
=> Applying pkgsrc patches for slurm-2.6.4nb9
=> Verifying /data/pkgsrc/parallel/slurm/patches/patch-doc_html_Makefile.am
=> Applying pkgsrc patch /data/pkgsrc/parallel/slurm/patches/patch-doc_html_Makefile.am
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-doc_html_Makefile.am,v 1.2 2013/12/06 06:05:30 asau Exp $
|
|--- doc/html/Makefile.am.orig 2013-11-04 21:19:15.000000000 +0000
|+++ doc/html/Makefile.am
--------------------------
Patching file doc/html/Makefile.am using Plan A...
Hunk #1 succeeded at 1.
done
=> Verifying /data/pkgsrc/parallel/slurm/patches/patch-doc_html_Makefile.in
=> Applying pkgsrc patch /data/pkgsrc/parallel/slurm/patches/patch-doc_html_Makefile.in
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-doc_html_Makefile.in,v 1.2 2013/12/06 06:05:30 asau Exp $
|
|--- doc/html/Makefile.in.orig 2013-11-04 21:19:15.000000000 +0000
|+++ doc/html/Makefile.in
--------------------------
Patching file doc/html/Makefile.in using Plan A...
Hunk #1 succeeded at 341.
done
=> Verifying /data/pkgsrc/parallel/slurm/patches/patch-doc_man_man1_Makefile.am
=> Applying pkgsrc patch /data/pkgsrc/parallel/slurm/patches/patch-doc_man_man1_Makefile.am
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-doc_man_man1_Makefile.am,v 1.2 2013/12/06 06:05:30 asau Exp $
|
|--- doc/man/man1/Makefile.am.orig 2013-11-04 21:19:15.000000000 +0000
|+++ doc/man/man1/Makefile.am
--------------------------
Patching file doc/man/man1/Makefile.am using Plan A...
Hunk #1 succeeded at 1.
done
=> Verifying /data/pkgsrc/parallel/slurm/patches/patch-doc_man_man1_Makefile.in
=> Applying pkgsrc patch /data/pkgsrc/parallel/slurm/patches/patch-doc_man_man1_Makefile.in
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-doc_man_man1_Makefile.in,v 1.2 2013/12/06 06:05:30 asau Exp $
|
|--- doc/man/man1/Makefile.in.orig 2013-11-04 21:19:15.000000000 +0000
|+++ doc/man/man1/Makefile.in
--------------------------
Patching file doc/man/man1/Makefile.in using Plan A...
Hunk #1 succeeded at 343.
done
=> Verifying /data/pkgsrc/parallel/slurm/patches/patch-doc_man_man5_Makefile.am
=> Applying pkgsrc patch /data/pkgsrc/parallel/slurm/patches/patch-doc_man_man5_Makefile.am
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-doc_man_man5_Makefile.am,v 1.2 2013/12/06 06:05:30 asau Exp $
|
|--- doc/man/man5/Makefile.am.orig 2013-11-04 21:19:15.000000000 +0000
|+++ doc/man/man5/Makefile.am
--------------------------
Patching file doc/man/man5/Makefile.am using Plan A...
Hunk #1 succeeded at 1.
done
=> Verifying /data/pkgsrc/parallel/slurm/patches/patch-doc_man_man5_Makefile.in
=> Applying pkgsrc patch /data/pkgsrc/parallel/slurm/patches/patch-doc_man_man5_Makefile.in
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-doc_man_man5_Makefile.in,v 1.2 2013/12/06 06:05:30 asau Exp $
|
|--- doc/man/man5/Makefile.in.orig 2013-11-04 21:19:15.000000000 +0000
|+++ doc/man/man5/Makefile.in
--------------------------
Patching file doc/man/man5/Makefile.in using Plan A...
Hunk #1 succeeded at 343.
done
=> Verifying /data/pkgsrc/parallel/slurm/patches/patch-doc_man_man8_Makefile.am
=> Applying pkgsrc patch /data/pkgsrc/parallel/slurm/patches/patch-doc_man_man8_Makefile.am
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-doc_man_man8_Makefile.am,v 1.2 2013/12/06 06:05:30 asau Exp $
|
|--- doc/man/man8/Makefile.am.orig 2013-11-04 21:19:15.000000000 +0000
|+++ doc/man/man8/Makefile.am
--------------------------
Patching file doc/man/man8/Makefile.am using Plan A...
Hunk #1 succeeded at 1.
done
=> Verifying /data/pkgsrc/parallel/slurm/patches/patch-doc_man_man8_Makefile.in
=> Applying pkgsrc patch /data/pkgsrc/parallel/slurm/patches/patch-doc_man_man8_Makefile.in
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-doc_man_man8_Makefile.in,v 1.2 2013/12/06 06:05:30 asau Exp $
|
|--- doc/man/man8/Makefile.in.orig 2013-11-04 21:19:15.000000000 +0000
|+++ doc/man/man8/Makefile.in
--------------------------
Patching file doc/man/man8/Makefile.in using Plan A...
Hunk #1 succeeded at 343.
done
=> Verifying /data/pkgsrc/parallel/slurm/patches/patch-src_common_net.c
=> Applying pkgsrc patch /data/pkgsrc/parallel/slurm/patches/patch-src_common_net.c
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-src_common_net.c,v 1.1 2013/12/06 06:05:30 asau Exp $
|
|--- src/common/net.c.orig 2013-11-04 21:19:15.000000000 +0000
|+++ src/common/net.c
--------------------------
Patching file src/common/net.c using Plan A...
Hunk #1 succeeded at 52.
Hunk #2 succeeded at 216.
done
=> Verifying /data/pkgsrc/parallel/slurm/patches/patch-src_common_slurm__jobacct__gather.c
=> Applying pkgsrc patch /data/pkgsrc/parallel/slurm/patches/patch-src_common_slurm__jobacct__gather.c
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-src_common_slurm__jobacct__gather.c,v 1.1 2013/12/06 06:05:30 asau Exp $
|
|--- src/common/slurm_jobacct_gather.c.orig 2013-11-04 21:19:15.000000000 +0000
|+++ src/common/slurm_jobacct_gather.c
--------------------------
Patching file src/common/slurm_jobacct_gather.c using Plan A...
Hunk #1 succeeded at 47.
done
=> Verifying /data/pkgsrc/parallel/slurm/patches/patch-src_common_xcgroup.c
=> Applying pkgsrc patch /data/pkgsrc/parallel/slurm/patches/patch-src_common_xcgroup.c
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-src_common_xcgroup.c,v 1.1 2013/12/06 06:05:30 asau Exp $
|
|--- src/common/xcgroup.c.orig 2013-11-04 21:19:15.000000000 +0000
|+++ src/common/xcgroup.c
--------------------------
Patching file src/common/xcgroup.c using Plan A...
Hunk #1 succeeded at 217.
done
=> Verifying /data/pkgsrc/parallel/slurm/patches/patch-src_common_xcgroup.h
=> Applying pkgsrc patch /data/pkgsrc/parallel/slurm/patches/patch-src_common_xcgroup.h
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-src_common_xcgroup.h,v 1.1 2013/12/06 06:05:30 asau Exp $
|
|--- src/common/xcgroup.h.orig 2013-11-04 21:19:15.000000000 +0000
|+++ src/common/xcgroup.h
--------------------------
Patching file src/common/xcgroup.h using Plan A...
Hunk #1 succeeded at 49.
done
=> Verifying /data/pkgsrc/parallel/slurm/patches/patch-src_plugins_acct__gather__filesystem_lustre_acct__gather__filesystem__lustre.c
=> Applying pkgsrc patch /data/pkgsrc/parallel/slurm/patches/patch-src_plugins_acct__gather__filesystem_lustre_acct__gather__filesystem__lustre.c
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-src_plugins_acct__gather__filesystem_lustre_acct__gather__filesystem__lustre.c,v 1.2 2014/03/19 22:05:39 asau Exp $
|
|--- src/plugins/acct_gather_filesystem/lustre/acct_gather_filesystem_lustre.c.orig 2013-12-23 19:38:25.000000000 +0000
|+++ src/plugins/acct_gather_filesystem/lustre/acct_gather_filesystem_lustre.c
--------------------------
Patching file src/plugins/acct_gather_filesystem/lustre/acct_gather_filesystem_lustre.c using Plan A...
Hunk #1 succeeded at 49.
done
=> Verifying /data/pkgsrc/parallel/slurm/patches/patch-src_slurmctld_reservation.c
=> Applying pkgsrc patch /data/pkgsrc/parallel/slurm/patches/patch-src_slurmctld_reservation.c
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-src_slurmctld_reservation.c,v 1.1 2013/12/06 06:05:30 asau Exp $
|
|--- src/slurmctld/reservation.c.orig 2013-11-04 21:19:15.000000000 +0000
|+++ src/slurmctld/reservation.c
--------------------------
Patching file src/slurmctld/reservation.c using Plan A...
Hunk #1 succeeded at 44.
done
=> Verifying /data/pkgsrc/parallel/slurm/patches/patch-src_slurmd_common_setproctitle.c
=> Applying pkgsrc patch /data/pkgsrc/parallel/slurm/patches/patch-src_slurmd_common_setproctitle.c
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-src_slurmd_common_setproctitle.c,v 1.1 2013/12/06 06:05:30 asau Exp $
|
|--- src/slurmd/common/setproctitle.c.orig 2013-11-04 21:19:15.000000000 +0000
|+++ src/slurmd/common/setproctitle.c
--------------------------
Patching file src/slurmd/common/setproctitle.c using Plan A...
Hunk #1 succeeded at 90.
done
=> Verifying /data/pkgsrc/parallel/slurm/patches/patch-src_slurmd_slurmstepd_task.c
=> Applying pkgsrc patch /data/pkgsrc/parallel/slurm/patches/patch-src_slurmd_slurmstepd_task.c
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-src_slurmd_slurmstepd_task.c,v 1.1 2013/12/06 06:05:30 asau Exp $
|
|--- src/slurmd/slurmstepd/task.c.orig 2013-11-04 21:19:15.000000000 +0000
|+++ src/slurmd/slurmstepd/task.c
--------------------------
Patching file src/slurmd/slurmstepd/task.c using Plan A...
Hunk #1 succeeded at 501.
done
=> Verifying /data/pkgsrc/parallel/slurm/patches/patch-src_srun_libsrun_debugger.c
=> Applying pkgsrc patch /data/pkgsrc/parallel/slurm/patches/patch-src_srun_libsrun_debugger.c
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-src_srun_libsrun_debugger.c,v 1.1 2013/12/06 06:05:30 asau Exp $
|
|--- src/srun/libsrun/debugger.c.orig 2013-11-04 21:19:15.000000000 +0000
|+++ src/srun/libsrun/debugger.c
--------------------------
Patching file src/srun/libsrun/debugger.c using Plan A...
Hunk #1 succeeded at 38.
done
=> Verifying /data/pkgsrc/parallel/slurm/patches/patch-src_srun_libsrun_launch.c
=> Applying pkgsrc patch /data/pkgsrc/parallel/slurm/patches/patch-src_srun_libsrun_launch.c
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-src_srun_libsrun_launch.c,v 1.1 2013/12/06 06:05:30 asau Exp $
|
|--- src/srun/libsrun/launch.c.orig 2013-11-04 21:19:15.000000000 +0000
|+++ src/srun/libsrun/launch.c
--------------------------
Patching file src/srun/libsrun/launch.c using Plan A...
Hunk #1 succeeded at 36.
done
===> Creating toolchain wrappers for slurm-2.6.4nb9
===> Configuring for slurm-2.6.4nb9
=> Modifying GNU configure scripts to avoid --recheck
=> Replacing config-guess with pkgsrc versions
=> Replacing config-sub with pkgsrc versions
=> Replacing install-sh with pkgsrc version
=> Checking for portability problems in extracted files
checking build system type... x86_64--netbsd
checking host system type... x86_64--netbsd
checking target system type... x86_64--netbsd
checking for a BSD-compatible install... /usr/bin/install -c -o pbulkXXX -g users
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... auxdir/install-sh -c -d
checking for gawk... /usr/bin/awk
checking whether make sets $(MAKE)... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking whether to include rpath in build... yes
checking for style of include used by make... GNU
checking for x86_64--netbsd-gcc... clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether clang accepts -g... yes
checking for clang option to accept ISO C89... none needed
checking dependency style of clang... gcc3
checking whether we are using the GNU C++ compiler... yes
checking whether clang++ accepts -g... yes
checking dependency style of clang++... gcc3
checking how to run the C preprocessor... clang -E
checking for grep that handles long lines and -e... (cached) /usr/bin/grep
checking for egrep... (cached) /usr/bin/egrep
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for x86_64--netbsd-gcc... (cached) clang
checking whether we are using the GNU C compiler... (cached) yes
checking whether clang accepts -g... (cached) yes
checking for clang option to accept ISO C89... (cached) none needed
checking dependency style of clang... (cached) gcc3
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether clang++ accepts -g... (cached) yes
checking dependency style of clang++... (cached) gcc3
checking whether make sets $(MAKE)... (cached) yes
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for fgrep... /usr/bin/grep -F
checking for ld used by clang... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... (cached) 262144
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... no
checking how to convert x86_64--netbsd file names to x86_64--netbsd format... func_convert_file_noop
checking how to convert x86_64--netbsd file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for x86_64--netbsd-objdump... no
checking for objdump... objdump
checking how to recognize dependent libraries... match_pattern /lib[^/]+(\.so|_pic\.a)$
checking for x86_64--netbsd-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for x86_64--netbsd-ar... no
checking for ar... ar
checking for archiver @FILE support... @
checking for x86_64--netbsd-strip... no
checking for strip... strip
checking for x86_64--netbsd-ranlib... no
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from clang object... ok
checking for sysroot... no
checking for x86_64--netbsd-mt... no
checking for mt... mt
checking if mt is a manifest tool... no
checking for dlfcn.h... yes
checking for objdir... .libs
checking if clang supports -fno-rtti -fno-exceptions... yes
checking for clang option to produce PIC... -fPIC -DPIC
checking if clang PIC flag -fPIC -DPIC works... yes
checking if clang static flag -static works... yes
checking if clang supports -c -o file.o... rm: conftest*: No such file or directory
yes
checking if clang supports -c -o file.o... (cached) yes
checking whether the clang linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... rm: conftest*: No such file or directory
no
checking dynamic linker characteristics... NetBSD ld.elf_so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... clang++ -E
checking for ld used by clang++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the clang++ linker (/usr/bin/ld) supports shared libraries... yes
checking for clang++ option to produce PIC... -fPIC -DPIC
checking if clang++ PIC flag -fPIC -DPIC works... yes
checking if clang++ static flag -static works... yes
checking if clang++ supports -c -o file.o... rm: conftest*: No such file or directory
yes
checking if clang++ supports -c -o file.o... (cached) yes
checking whether the clang++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... NetBSD ld.elf_so
checking how to hardcode library paths into programs... immediate
checking pkg-config is at least version 0.9.0... yes
checking for library containing socket... none required
checking for library containing gethostbyname... none required
checking for library containing hstrerror... none required
checking for library containing kstat_open... no
checking mcheck.h usability... no
checking mcheck.h presence... no
checking for mcheck.h... no
checking values.h usability... no
checking values.h presence... no
checking for values.h... no
checking socket.h usability... no
checking socket.h presence... no
checking for socket.h... no
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking stdbool.h usability... yes
checking stdbool.h presence... yes
checking for stdbool.h... yes
checking sys/ipc.h usability... yes
checking sys/ipc.h presence... yes
checking for sys/ipc.h... yes
checking sys/shm.h usability... yes
checking sys/shm.h presence... yes
checking for sys/shm.h... yes
checking sys/sem.h usability... yes
checking sys/sem.h presence... yes
checking for sys/sem.h... yes
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking for stdlib.h... (cached) yes
checking dirent.h usability... yes
checking dirent.h presence... yes
checking for dirent.h... yes
checking pthread.h usability... yes
checking pthread.h presence... yes
checking for pthread.h... yes
checking sys/prctl.h usability... no
checking sys/prctl.h presence... no
checking for sys/prctl.h... no
checking sysint.h usability... no
checking sysint.h presence... no
checking for sysint.h... no
checking for inttypes.h... (cached) yes
checking termcap.h usability... yes
checking termcap.h presence... yes
checking for termcap.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking for sys/socket.h... (cached) yes
checking sys/systemcfg.h usability... no
checking sys/systemcfg.h presence... no
checking for sys/systemcfg.h... no
checking ncurses.h usability... no
checking ncurses.h presence... no
checking for ncurses.h... no
checking curses.h usability... yes
checking curses.h presence... yes
checking for curses.h... yes
checking sys/dr.h usability... no
checking sys/dr.h presence... no
checking for sys/dr.h... no
checking sys/vfs.h usability... no
checking sys/vfs.h presence... no
checking for sys/vfs.h... no
checking pam/pam_appl.h usability... no
checking pam/pam_appl.h presence... no
checking for pam/pam_appl.h... no
checking security/pam_appl.h usability... yes
checking security/pam_appl.h presence... yes
checking for security/pam_appl.h... yes
checking sys/sysctl.h usability... yes
checking sys/sysctl.h presence... yes
checking for sys/sysctl.h... yes
checking pty.h usability... no
checking pty.h presence... no
checking for pty.h... no
checking utmp.h usability... yes
checking utmp.h presence... yes
checking for utmp.h... yes
checking sys/syslog.h usability... yes
checking sys/syslog.h presence... yes
checking for sys/syslog.h... yes
checking linux/sched.h usability... no
checking linux/sched.h presence... no
checking for linux/sched.h... no
checking kstat.h usability... no
checking kstat.h presence... no
checking for kstat.h... no
checking paths.h usability... yes
checking paths.h presence... yes
checking for paths.h... yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking sys/statfs.h usability... no
checking sys/statfs.h presence... no
checking for sys/statfs.h... no
checking sys/ptrace.h usability... yes
checking sys/ptrace.h presence... yes
checking for sys/ptrace.h... yes
checking sys/termios.h usability... yes
checking sys/termios.h presence... yes
checking for sys/termios.h... yes
checking float.h usability... yes
checking float.h presence... yes
checking for float.h... yes
checking for sys/wait.h that is POSIX.1 compatible... yes
checking whether time.h and sys/time.h may both be included... yes
checking for ANSI C header files... (cached) yes
checking library containing dlopen... checking for dlopen in -l... no
checking for dlopen in -ldl... no
checking for dlopen in -lsvdl... no
checking for program_invocation_name... no
checking for ptrace64... no
checking for sched_setaffinity... no
checking for numa_available in -lnuma... no
configure: WARNING: Unable to locate NUMA memory affinity functions
checking whether to enable PAM support... yes
checking for pam_get_user in -lpam... yes
checking for misc_conv in -lpam_misc... no
configure: WARNING: Unable to locate PAM libraries
checking whether to enable RFC 5424 time format support... no
checking log timestamps to millisecond resolution... yes
checking whether to enable ISO 8601 time format support... yes
checking whether sbatch --get-user-env option should load .login... no
checking whether byte ordering is bigendian... no
checking whether clang needs -traditional... no
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
checking whether strerror_r is declared... yes
checking for strerror_r... yes
checking whether strerror_r returns char *... no
checking for fdatasync... yes
checking for hstrerror... yes
checking for strerror... yes
checking for mtrace... no
checking for strndup... yes
checking for strlcpy... yes
checking for strsignal... yes
checking for inet_aton... yes
checking for inet_ntop... yes
checking for inet_pton... yes
checking for setproctitle... yes
checking for sysctlbyname... yes
checking for cfmakeraw... yes
checking for setresuid... no
checking whether hstrerror is declared... no
checking whether strsignal is declared... yes
checking whether sys_siglist is declared... yes
checking for unsetenv... yes
checking for pthread_join in LIBS= with CFLAGS= -pthread ... yes
checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE
checking if more special flags are required for pthreads... no
checking for cc_r... clang
checking for Sun Constellation system... no
checking System dimensions... not set
checking for ofed installation...
configure: WARNING: unable to locate ofed installation
checking for hwloc installation...
configure: WARNING: unable to locate hwloc installation
checking for freeipmi installation...
configure: WARNING: unable to locate freeipmi installation
checking whether XCPU is enabled... no
checking for sem_open in -lposix4... no
with rrdtool check
without rrdtool
checking for rrdtool installation...
x_ac_cv_rrdtool_dir
configure: WARNING: unable to locate rrdtool installation
checking for initscr in -lncurses... no
checking for initscr in -lcurses... yes
NCURSES test program built properly.
checking for CHECK... no
checking pkg-config is at least version 0.16... yes
checking for GLIB - version >= 2.7.1... no
*** Could not run GLIB test program, checking why...
*** The test program failed to compile or link. See the file config.log for the
*** exact error that occured. This usually means GLIB is incorrectly installed.
checking for pkg-config... /data/scratch/parallel/slurm/work/.tools/bin/pkg-config
checking for GTK+ - version >= 2.7.1... no
*** Could not run GTK+ test program, checking why...
*** The test program failed to compile or link. See the file config.log for the
*** exact error that occured. This usually means GTK+ is incorrectly installed.
checking for mysql_config... no
configure: WARNING: *** mysql_config not found. Evidently no MySQL development libs installed on system.
checking for pg_config... no
configure: WARNING: *** pg_config not found. Evidently no PostgreSQL development libs installed on system.
checking whether this is a native Cray XT or XE system or have ALPS simulator... no
checking for __progname... yes
checking whether debugging is enabled... no
checking whether memory leak debugging is enabled... no
checking whether to enable slurmd operation on a front-end... no
checking whether debugger partial attach enabled... no
checking whether salloc should kill child processes at job termination... no
checking whether to disable salloc execution in the background... no
checking for slurmctld default port... 6817
checking for slurmd default port... 6818
checking for slurmdbd default port... 6819
checking for slurmctld default port count... 1
checking for dynamic allocation port to be enabled... no
checking Checking NRT and PERMAPI header files... no
configure: Cannot support IBM NRT without nrt.h and permapi.h
checking whether to enable IBM NRT support... no
checking for job_attachpid in -ljob... no
checking for SGI job container support... no
checking for lua... no
checking whether man2html is available... checking for man2html... no
configure: Unable to build man page html files without man2html
checking for support of printf("%s", NULL)... yes
checking for whether to include readline suport... yes
checking for OpenSSL directory... /usr
checking for munge installation... /usr/pkg
checking whether to enable multiple-slurmd support... no
checking for auth_init_credentials in -lauth... no
checking for openpty in -lutil... yes
checking for blcr installation...
configure: WARNING: unable to locate blcr installation
configure: creating ./config.status
config.status: creating Makefile
config.status: creating config.xml
config.status: creating auxdir/Makefile
config.status: creating contribs/Makefile
config.status: creating contribs/cray/Makefile
config.status: creating contribs/cray/opt_modulefiles_slurm
config.status: creating contribs/lua/Makefile
config.status: creating contribs/mic/Makefile
config.status: creating contribs/pam/Makefile
config.status: creating contribs/perlapi/Makefile
config.status: creating contribs/perlapi/libslurm/Makefile
config.status: creating contribs/perlapi/libslurm/perl/Makefile.PL
config.status: creating contribs/perlapi/libslurmdb/Makefile
config.status: creating contribs/perlapi/libslurmdb/perl/Makefile.PL
config.status: creating contribs/torque/Makefile
config.status: creating contribs/phpext/Makefile
config.status: creating contribs/phpext/slurm_php/config.m4
config.status: creating contribs/sjobexit/Makefile
config.status: creating contribs/slurmdb-direct/Makefile
config.status: creating contribs/pmi2/Makefile
config.status: creating doc/Makefile
config.status: creating doc/man/Makefile
config.status: creating doc/man/man1/Makefile
config.status: creating doc/man/man3/Makefile
config.status: creating doc/man/man5/Makefile
config.status: creating doc/man/man8/Makefile
config.status: creating doc/html/Makefile
config.status: creating doc/html/configurator.html
config.status: creating doc/html/configurator.easy.html
config.status: creating etc/init.d.slurm
config.status: creating etc/init.d.slurmdbd
config.status: creating src/Makefile
config.status: creating src/api/Makefile
config.status: creating src/common/Makefile
config.status: creating src/db_api/Makefile
config.status: creating src/database/Makefile
config.status: creating src/sacct/Makefile
config.status: creating src/sacctmgr/Makefile
config.status: creating src/sreport/Makefile
config.status: creating src/sstat/Makefile
config.status: creating src/sshare/Makefile
config.status: creating src/salloc/Makefile
config.status: creating src/sbatch/Makefile
config.status: creating src/sattach/Makefile
config.status: creating src/sdiag/Makefile
config.status: creating src/sprio/Makefile
config.status: creating src/srun/Makefile
config.status: creating src/srun/libsrun/Makefile
config.status: creating src/srun_cr/Makefile
config.status: creating src/slurmd/Makefile
config.status: creating src/slurmd/common/Makefile
config.status: creating src/slurmd/slurmd/Makefile
config.status: creating src/slurmd/slurmstepd/Makefile
config.status: creating src/slurmdbd/Makefile
config.status: creating src/slurmctld/Makefile
config.status: creating src/sbcast/Makefile
config.status: creating src/scontrol/Makefile
config.status: creating src/scancel/Makefile
config.status: creating src/squeue/Makefile
config.status: creating src/sinfo/Makefile
config.status: creating src/smap/Makefile
config.status: creating src/strigger/Makefile
config.status: creating src/sview/Makefile
config.status: creating src/plugins/Makefile
config.status: creating src/plugins/accounting_storage/Makefile
config.status: creating src/plugins/accounting_storage/common/Makefile
config.status: creating src/plugins/accounting_storage/filetxt/Makefile
config.status: creating src/plugins/accounting_storage/mysql/Makefile
config.status: creating src/plugins/accounting_storage/pgsql/Makefile
config.status: creating src/plugins/accounting_storage/none/Makefile
config.status: creating src/plugins/accounting_storage/slurmdbd/Makefile
config.status: creating src/plugins/auth/Makefile
config.status: creating src/plugins/auth/authd/Makefile
config.status: creating src/plugins/auth/munge/Makefile
config.status: creating src/plugins/auth/none/Makefile
config.status: creating src/plugins/checkpoint/Makefile
config.status: creating src/plugins/checkpoint/aix/Makefile
config.status: creating src/plugins/checkpoint/blcr/Makefile
config.status: creating src/plugins/checkpoint/blcr/cr_checkpoint.sh
config.status: creating src/plugins/checkpoint/blcr/cr_restart.sh
config.status: creating src/plugins/checkpoint/none/Makefile
config.status: creating src/plugins/checkpoint/ompi/Makefile
config.status: creating src/plugins/checkpoint/poe/Makefile
config.status: creating src/plugins/crypto/Makefile
config.status: creating src/plugins/crypto/munge/Makefile
config.status: creating src/plugins/crypto/openssl/Makefile
config.status: creating src/plugins/ext_sensors/Makefile
config.status: creating src/plugins/ext_sensors/rrd/Makefile
config.status: creating src/plugins/ext_sensors/none/Makefile
config.status: creating src/plugins/gres/Makefile
config.status: creating src/plugins/gres/gpu/Makefile
config.status: creating src/plugins/gres/nic/Makefile
config.status: creating src/plugins/gres/mic/Makefile
config.status: creating src/plugins/jobacct_gather/Makefile
config.status: creating src/plugins/jobacct_gather/linux/Makefile
config.status: creating src/plugins/jobacct_gather/aix/Makefile
config.status: creating src/plugins/jobacct_gather/cgroup/Makefile
config.status: creating src/plugins/jobacct_gather/none/Makefile
config.status: creating src/plugins/acct_gather_energy/Makefile
config.status: creating src/plugins/acct_gather_energy/rapl/Makefile
config.status: creating src/plugins/acct_gather_energy/ipmi/Makefile
config.status: creating src/plugins/acct_gather_energy/none/Makefile
config.status: creating src/plugins/acct_gather_infiniband/Makefile
config.status: creating src/plugins/acct_gather_infiniband/ofed/Makefile
config.status: creating src/plugins/acct_gather_infiniband/none/Makefile
config.status: creating src/plugins/acct_gather_filesystem/Makefile
config.status: creating src/plugins/acct_gather_filesystem/lustre/Makefile
config.status: creating src/plugins/acct_gather_filesystem/none/Makefile
config.status: creating src/plugins/acct_gather_profile/Makefile
config.status: creating src/plugins/acct_gather_profile/hdf5/Makefile
config.status: creating src/plugins/acct_gather_profile/hdf5/sh5util/Makefile
config.status: creating src/plugins/acct_gather_profile/none/Makefile
config.status: creating src/plugins/jobcomp/Makefile
config.status: creating src/plugins/jobcomp/filetxt/Makefile
config.status: creating src/plugins/jobcomp/none/Makefile
config.status: creating src/plugins/jobcomp/script/Makefile
config.status: creating src/plugins/jobcomp/mysql/Makefile
config.status: creating src/plugins/jobcomp/pgsql/Makefile
config.status: creating src/plugins/job_submit/Makefile
config.status: creating src/plugins/job_submit/all_partitions/Makefile
config.status: creating src/plugins/job_submit/cnode/Makefile
config.status: creating src/plugins/job_submit/defaults/Makefile
config.status: creating src/plugins/job_submit/logging/Makefile
config.status: creating src/plugins/job_submit/lua/Makefile
config.status: creating src/plugins/job_submit/partition/Makefile
config.status: creating src/plugins/job_submit/pbs/Makefile
config.status: creating src/plugins/job_submit/require_timelimit/Makefile
config.status: creating src/plugins/launch/Makefile
config.status: creating src/plugins/launch/aprun/Makefile
config.status: creating src/plugins/launch/poe/Makefile
config.status: creating src/plugins/launch/runjob/Makefile
config.status: creating src/plugins/launch/slurm/Makefile
config.status: creating src/plugins/preempt/Makefile
config.status: creating src/plugins/preempt/none/Makefile
config.status: creating src/plugins/preempt/partition_prio/Makefile
config.status: creating src/plugins/preempt/qos/Makefile
config.status: creating src/plugins/priority/Makefile
config.status: creating src/plugins/priority/basic/Makefile
config.status: creating src/plugins/priority/multifactor/Makefile
config.status: creating src/plugins/proctrack/Makefile
config.status: creating src/plugins/proctrack/aix/Makefile
config.status: creating src/plugins/proctrack/cgroup/Makefile
config.status: creating src/plugins/proctrack/pgid/Makefile
config.status: creating src/plugins/proctrack/linuxproc/Makefile
config.status: creating src/plugins/proctrack/sgi_job/Makefile
config.status: creating src/plugins/proctrack/lua/Makefile
config.status: creating src/plugins/sched/Makefile
config.status: creating src/plugins/sched/backfill/Makefile
config.status: creating src/plugins/sched/builtin/Makefile
config.status: creating src/plugins/sched/hold/Makefile
config.status: creating src/plugins/sched/wiki/Makefile
config.status: creating src/plugins/sched/wiki2/Makefile
config.status: creating src/plugins/select/Makefile
config.status: creating src/plugins/select/bluegene/Makefile
config.status: creating src/plugins/select/bluegene/ba/Makefile
config.status: creating src/plugins/select/bluegene/ba_bgq/Makefile
config.status: creating src/plugins/select/bluegene/bl/Makefile
config.status: creating src/plugins/select/bluegene/bl_bgq/Makefile
config.status: creating src/plugins/select/bluegene/sfree/Makefile
config.status: creating src/plugins/select/cons_res/Makefile
config.status: creating src/plugins/select/cray/Makefile
config.status: creating src/plugins/select/cray/libalps/Makefile
config.status: creating src/plugins/select/cray/libemulate/Makefile
config.status: creating src/plugins/select/linear/Makefile
config.status: creating src/plugins/select/serial/Makefile
config.status: creating src/plugins/slurmctld/Makefile
config.status: creating src/plugins/slurmctld/dynalloc/Makefile
config.status: creating src/plugins/switch/Makefile
config.status: creating src/plugins/switch/none/Makefile
config.status: creating src/plugins/switch/nrt/Makefile
config.status: creating src/plugins/switch/nrt/libpermapi/Makefile
config.status: creating src/plugins/mpi/Makefile
config.status: creating src/plugins/mpi/mpich1_p4/Makefile
config.status: creating src/plugins/mpi/mpich1_shmem/Makefile
config.status: creating src/plugins/mpi/mpichgm/Makefile
config.status: creating src/plugins/mpi/mpichmx/Makefile
config.status: creating src/plugins/mpi/mvapich/Makefile
config.status: creating src/plugins/mpi/lam/Makefile
config.status: creating src/plugins/mpi/none/Makefile
config.status: creating src/plugins/mpi/openmpi/Makefile
config.status: creating src/plugins/mpi/pmi2/Makefile
config.status: creating src/plugins/task/Makefile
config.status: creating src/plugins/task/affinity/Makefile
config.status: creating src/plugins/task/cgroup/Makefile
config.status: creating src/plugins/task/none/Makefile
config.status: creating src/plugins/topology/Makefile
config.status: creating src/plugins/topology/3d_torus/Makefile
config.status: creating src/plugins/topology/node_rank/Makefile
config.status: creating src/plugins/topology/none/Makefile
config.status: creating src/plugins/topology/tree/Makefile
config.status: creating testsuite/Makefile
config.status: creating testsuite/expect/Makefile
config.status: creating testsuite/slurm_unit/Makefile
config.status: creating testsuite/slurm_unit/api/Makefile
config.status: creating testsuite/slurm_unit/api/manual/Makefile
config.status: creating testsuite/slurm_unit/common/Makefile
config.status: creating config.h
config.status: creating slurm/slurm.h
config.status: executing depfiles commands
config.status: executing libtool commands
rm: libtoolT: No such file or directory
=> Modifying libtool scripts to use pkgsrc libtool
=> Modifying libtool scripts to use pkgsrc depcomp