# atomtype color radius van-der-waals-radii(used to determine bond)
H 0xAAAAAA 6 1.2
C 0x00FF00 10 2.0
# for alpha carbon, not for calcium
Ca 0x00FF00 10 2.0
N 0x0000FF 10 2.0
O 0xFF0000 10 2.0
F 0xF8ABA6 10 2.0
Na 0xAFDFE4 12 2.0
Mg 0x001F43 14 2.5
S 0xFFFF00 14 3.0
P 0xF8ABA6 14 3.0
Cl 0x008000 14 3.0
